This is one of those questions that has a lot of answers. Every Mark I've owned, I've done a system. If your are going to upgrade your head unit, and keep the factory speakers and factory amp, you wont get decent sound unless you upgrade the rest of the system, including adding some kind of amp to get decent hi's and lo's. I suggest doing everything at one time. The factory system is more than adequate and giving decent sound. It's not going to give you mind numbing bass though.
Replacing speakers while keeping the stock head unit can be done, but it wont sound right. The factory speakers are tuned to work with the head unit. Why are you wanting to change? What's going on with your system?
FYI the speakers that fit are 5"X7"