Im planning on installing a dvd deck into my 2001 LS and Ive picked up all the wiring kits and trim and everything i need for it. I was just curious if i will lose the center channel's and the factory sub. I dont really care about the center, but id like to keep the subs since i travel a bunch and dont feel like throwing a sub box in and out every other day. If they wont work with the new deck can anyone give me any tips on how to wire them back in to it all?

depends on what you mean by 'picked up all the wiring kits'.....

I recently had the Eclipse AVN5495 installed. Im pretty handy but its an install I wouldnt tackle on my own. I didnt lose use of the stock amps or the center speaker.

By picked up i mean i purchased the wiring kit that the website said i required for my car. I just finished the install and it sounds like everything is working like it used to. The only thing is that there is sometimes a 'pop' when everything comes on which comes out of the rear deck speakers. Ill see if i can get some pics of everything installed soon here. I got the pioneer deh5700 and the vdp1 vehicle dynamics processor. Just have to install the processor now.